This repository contains the released versions of the JSON-LD schema for the NF Research Tools Central. You can learn more about the schema/data model and other aspects of this project in our project documentation.

Learn more about the goals for this project by checking out the following documents and presentations:

Ashley Clayton, Mialy DeFelice, Brynn Zalmanek, Jay Hodgson, Caroline Morin, Stockard Simon, Julie A Bletz, James A Eddy, Milen Nikolov, Jineta Banerjee, Kalyan Vinnakota, Marco Marasca, Kevin J Boske, Bruce Hoff, Ljubomir Bradic, YooRi Kim, James R Goss, Robert J Allaway, Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database, Database, Volume 2022, 2022, baac045, https://doi.org/10.1093/database/baac045

Clayton, A., DeFelice, M., Zalmanek, B., Hodgson, J., Morin, C., Simon, S., … Allaway, R. (2022, January 25). Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database. https://doi.org/10.31222/osf.io/t6zaf

Zalmanek, Brynn; Allaway, Robert; Goss, James; Clayton, Ashley; Eddy, James; Throgmorton, Kaitlin; et al. (2021): NF Research Tools Database: An experimental resource database for the neurofibromatosis community. figshare. Poster. https://doi.org/10.6084/m9.figshare.14825271.v1

Gilbert Family Foundation Press Release.

To contribute changes to the schema, please create a new branch, modify the schema CSV as desired, commit, and file a PR. The jsonld will automatically be updated. Please do not modify the jsonld manually.

To update the nf-research-tools-attributes.csv and nf-research-tools.json:

1. Run the following command in Schematic and save the json output file as nf-research-tools.json in the schema-viz/data directory.

schematic viz -c config.yml tangled_tree_layers -ft component 

2. Run the following command in Schematic and save the csv output file as nf-research-tools-attributes.csv in the schema-viz/data directory.

schematic viz -c config.yml attributes