Skip to main content
Log in

Fungal degradation of calcium-, lead- and silicon-bearing minerals

  • Published:
Biometals Aims and scope Submit manuscript

Abstract

The aim of this study was to examine nutritional influence on the ability of selected filamentous fungi to mediate biogenic weathering of the minerals, apatite, galena and obsidian in order to provide further understanding of the roles of fungi as biogeochemical agents, particularly in relation to the cycling of metals and associated elements found in minerals. The impact of three organic acid producing fungi (Aspergillus niger, Serpula himantioides and Trametes versicolor) on apatite, galena and obsidian was examined in the absence and presence of a carbon and energy source (glucose). Manifestation of fungal weathering included corrosion of mineral surfaces, modification of the mineral substrate through transformation into secondary minerals (i.e. crystal formation) and hyphal penetration of the mineral substrate. Physicochemical interactions of fungal metabolites, e.g. H+ and organic acids, with the minerals are thought to be the primary driving forces responsible. All experimental fungi were capable of mineral surface colonization in the absence and presence of glucose but corrosion of the mineral surface and secondary mineral formation were affected by glucose availability. Only S. himantioides and T. versicolor were able to corrode apatite in the absence of glucose but none of the fungi were capable of doing so with the other minerals. In addition, crystal formation with galena was entirely dependent on the availability of glucose. Penetration of the mineral substrates by fungal hyphae occurred but this did not follow any particular pattern. Although the presence of glucose in the media appeared to influence positively the mineral penetrating abilities of the fungi, the results obtained also showed that some geochemical change(s) might occur under nutrient-limited conditions. It was, however, unclear whether the hyphae actively penetrated the minerals or were growing into pre-existing pores or cracks.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • P Adamo P. Violante (2000) ArticleTitleWeathering of rocks and neogenesis of minerals associated with lichen activity Appl Clay Sci. 16 229–256 Occurrence Handle10.1016/S0169-1317(99)00056-3 Occurrence Handle1:CAS:528:DC%2BD3cXivVCit7w%3D

    Article  CAS  Google Scholar 

  • HJ Arnott (1995) Calcium oxalate in fungi SR Khan (Eds) Calcium Oxalate in Biological Systems CRC Press Boca Raton 73–111

    Google Scholar 

  • C Ascaso J Wierzchos R. Castello (1998) ArticleTitleStudy of the biogenic weathering of calcareous litharenite stones caused by lichen and endolithic microorganisms Int Biodeter Biodegr 42 29–38 Occurrence Handle10.1016/S0964-8305(98)00043-2 Occurrence Handle1:CAS:528:DyaK1cXnslGlsr4%3D

    Article  CAS  Google Scholar 

  • JF Banfield WW Barker SA Welch A. Taunton (1999) ArticleTitleBiological impact on dissolution: application of the lichen model to understanding mineral weathering in the rhizosphere Proc Nat Acad Sci. USA 96 3404–3411 Occurrence Handle10.1073/pnas.96.7.3404 Occurrence Handle1:CAS:528:DyaK1MXjslCisbc%3D Occurrence Handle10097050

    Article  CAS  PubMed  Google Scholar 

  • PC Bennett JR Rogers WJ Choi FK. Hiebert (2001) ArticleTitleSilicates, silicate weathering, and microbial ecology Geomicrobiol J 18 3–19 Occurrence Handle10.1080/01490450151079734 Occurrence Handle1:CAS:528:DC%2BD3MXhvVaqurg%3D

    Article  CAS  Google Scholar 

  • DR Blaskett D. Boxal (1990) Lead and its Alloys Ellis Horwood Chichester, UK

    Google Scholar 

  • JD Blum A Klaue CA Nezat et al. (2002) ArticleTitleMycorrhizal weathering of apatite as an important calcium source in base-poor forest ecosystems Nature 417 729–731 Occurrence Handle10.1038/nature00793 Occurrence Handle1:CAS:528:DC%2BD38XksVGjtbg%3D Occurrence Handle12066181

    Article  CAS  PubMed  Google Scholar 

  • E Bock W. Sand (1993) ArticleTitleThe microbiology of masonry deterioration J Appl Bacteriol 74 503–514 Occurrence Handle1:CAS:528:DyaK3sXltFKnt7o%3D

    CAS  Google Scholar 

  • RG Burau (1982) Lead AL Page (Eds) Methods of Soil Analysis, Part 2. Chemical and Microbiological Properties – Agronomy Monograph No. 9. American Society of Agronomy-Soil Science Society of America Madison, USA 3473–65

    Google Scholar 

  • EP Burford M Fomina GM. Gadd (2003) ArticleTitleFungal involvement in bioweathering and biotransformation of rocks and minerals Mineral Mag 67 1127–1155 Occurrence Handle10.1180/0026461036760154 Occurrence Handle1:CAS:528:DC%2BD2cXhslOjur8%3D

    Article  CAS  Google Scholar 

  • W Burgstaller F. Schinner (1993) ArticleTitleLeaching of metals with fungi J Biotechnol 27 91–116 Occurrence Handle10.1016/0168-1656(93)90101-R Occurrence Handle1:CAS:528:DyaK3sXht1yrs70%3D

    Article  CAS  Google Scholar 

  • G Callot M Maurette L Pottier A. Dubois (1987) ArticleTitleBiogenic etching of microfractures in amorphous and crystalline silicates Nature 328 147–149 Occurrence Handle10.1038/328147a0 Occurrence Handle1:CAS:528:DyaL2sXkvVWit78%3D

    Article  CAS  Google Scholar 

  • BE Davies (1995) Lead BJ Alloway (Eds) Heavy Metals in Soils Blackie Glasgow 206–223

    Google Scholar 

  • M Diercks W Sand E. Bock (1991) ArticleTitleMicrobial corrosion of concrete Experientia 47 514–516 Occurrence Handle1:CAS:528:DyaK3MXltFSju7o%3D

    CAS  Google Scholar 

  • HL. Ehrlich (1981) Geomicrobiology Marcel Dekker Inc. New York

    Google Scholar 

  • HL. Ehrlich (1998) ArticleTitleGeomicrobiology: its significance for geology Earth-SciRev 45 45–60 Occurrence Handle10.1016/S0012-8252(98)00034-8 Occurrence Handle1:CAS:528:DyaK1cXnsFGhtb0%3D

    Article  CAS  Google Scholar 

  • GM. Gadd (1993) ArticleTitleInteractions of fungi with toxic metals New Phytol 124 25–60 Occurrence Handle1:CAS:528:DyaK3sXlvFOgs7Y%3D

    CAS  Google Scholar 

  • GM. Gadd (1999) ArticleTitleFungal production of citric and oxalic acid: importance in metal speciation, physiology and biogeochiemal processes Adv Microb Physiol 41 47–92 Occurrence Handle1:CAS:528:DC%2BD3cXjvFSgsw%3D%3D Occurrence Handle10500844

    CAS  PubMed  Google Scholar 

  • MM Gharieb JA Sayer GM. Gadd (1998) ArticleTitleSolubilization of natural gypsum (CaSO4.2H2O) and the formation of calcium oxalate by Aspergillus niger and Serpula himantioides Mycol Res 102 825–830 Occurrence Handle10.1017/S0953756297005510 Occurrence Handle1:CAS:528:DyaK1cXlsFCjtrY%3D

    Article  CAS  Google Scholar 

  • GW. Gooday (1995) ArticleTitleThe dynamics of hyphal growth Mycol Res 99 385–394

    Google Scholar 

  • SJ Gordon PV. Brady (2002) ArticleTitleIn situ determination of long-term basaltic glass dissolution in the unsaturated zone Chem Geol 190 113–122 Occurrence Handle10.1016/S0009-2541(02)00113-4 Occurrence Handle1:CAS:528:DC%2BD38XosFaisL0%3D

    Article  CAS  Google Scholar 

  • D Greninger V Kollonitsch CH Kline LC Willemsens JC. Cole (1974) Lead Chemicals International Lead Zinc Research Organization New York

    Google Scholar 

  • J Gu TE Ford NS Berke R. Mitchell (1998) ArticleTitleBiodeterioration of concrete by the fungus Fusarium. Int Biodeter Biodegrad 41 101–109 Occurrence Handle10.1016/S0964-8305(98)00034-1

    Article  Google Scholar 

  • MW Guidry FT. Mackenzie (2003) ArticleTitleExperimental study of igneous and sedimentary apatite dissolution: control of pH, distance from equilibrium, and temperature on dissolution rates Geochim Cosmochim Acta 67 2949–2963 Occurrence Handle10.1016/S0016-7037(03)00265-5 Occurrence Handle1:CAS:528:DC%2BD3sXlvFaqurw%3D

    Article  CAS  Google Scholar 

  • AD Harley RJ. Gilkes (2000) ArticleTitleFactors influencing the release of plant nutrient elements from silicate rock powders: a geochemical overview Nutrient Cycling in Agroecosystems 56 11–36 Occurrence Handle10.1023/A:1009859309453 Occurrence Handle1:CAS:528:DC%2BD3cXhvFWmtb4%3D

    Article  CAS  Google Scholar 

  • N Harris M Bickle H Chapman I Fairchild J. Bunbury (1998) ArticleTitleThe significance of Himalayan rivers for silicate weathering rates: evidence from the Bhote Kosi tributary Chem Geol 144 205–220 Occurrence Handle10.1016/S0009-2541(97)00132-0 Occurrence Handle1:CAS:528:DyaK1cXhvFertbo%3D

    Article  CAS  Google Scholar 

  • H Jacobs GP Boswell K Ritz FA Davidson GM. Gadd (2002) ArticleTitleSolubilization of calcium phosphate as a consequence of carbon translocation by Rhizoctonia solani FEMS Microbiol Ecol 40 65–71 Occurrence Handle10.1016/S0168-6496(02)00202-7 Occurrence Handle1:CAS:528:DC%2BD38XjvVejtLw%3D

    Article  CAS  Google Scholar 

  • AG Jongmans N Breemen Particlevan U Lundström et al. (1997) ArticleTitleRock-eating fungi Nature 389 682–683 Occurrence Handle10.1038/39493 Occurrence Handle1:CAS:528:DyaK2sXmvVSjtr8%3D

    Article  CAS  Google Scholar 

  • AC Kurtz LA Derry OA. Chadwick (2002) ArticleTitleGermanium-silicon fractionation in the weathering environment Geochim Cosmochim Acta 66 1525–1537 Occurrence Handle10.1016/S0016-7037(01)00869-9 Occurrence Handle1:CAS:528:DC%2BD38XivFOhs7w%3D

    Article  CAS  Google Scholar 

  • R Landeweert E Hoffland RD Finlay TW Kuyper N. Breemen Particlevan (2001) ArticleTitleLinking plants to rocks: ectomycorrhizal fungi mobilize nutrients from minerals Trends Ecol Evol 16 248–254 Occurrence Handle10.1016/S0169-5347(01)02122-X Occurrence Handle11301154

    Article  PubMed  Google Scholar 

  • F Lapeyrie J Ranger D. Vairelles (1991) ArticleTitlePhosphate-solubilizing activity of ectomycorrhizal fungi in vitro Can J Bot 69 342–346 Occurrence Handle1:CAS:528:DyaK3MXltFShsbc%3D

    CAS  Google Scholar 

  • MR Lee I. Parsons (1999) ArticleTitleBiomechanical and biochemical weathering of lichen-encrusted granite: textural controls on organic-mineral interactions and deposition of silica-rich layers Chem Geol 161 385–397 Occurrence Handle10.1016/S0009-2541(99)00117-5 Occurrence Handle1:CAS:528:DyaK1MXmsV2qsLY%3D

    Article  CAS  Google Scholar 

  • GA Low ME Young P Martin JW. Palfreyman (2000) ArticleTitleAssessing the relationship between the dry rot fungus Serpula lacrymans and selected forms of masonry Int Biodeter Biodegr 46 141–150 Occurrence Handle10.1016/S0964-8305(00)00089-5

    Article  Google Scholar 

  • YQ Ma SJ Traina TJ. Logan (1993) ArticleTitleIn situ lead immobilization by apatite Environ Sci Technol 27 1803–1810 Occurrence Handle10.1021/es00046a007 Occurrence Handle1:CAS:528:DyaK3sXltVamtrg%3D

    Article  CAS  Google Scholar 

  • GS Pokrovski J. Schott (1998) ArticleTitleExperimental study of the complexation of silicon and germanium with aqueous organic species: implications for germanium and silicon transport and Ge/Si ratio in natural water Geochim Cosmochim Acta 62 3413–3428 Occurrence Handle10.1016/S0016-7037(98)00249-X Occurrence Handle1:CAS:528:DyaK1MXislSgtbo%3D

    Article  CAS  Google Scholar 

  • JR Rogers PC Bennett WJ. Choi (1998) ArticleTitleFeldspars as a source of nutrients for microorganisms Am. Mineral 83 1532–1540 Occurrence Handle1:CAS:528:DyaK1cXnvV2ltLY%3D

    CAS  Google Scholar 

  • MV Ruby A Davis A. Nicholson (1994) ArticleTitleIn situ formation of lead phosphates in soils as a method to immobilize lead Environ Sci Technol 28 646–654 Occurrence Handle10.1021/es00053a018 Occurrence Handle1:CAS:528:DyaK2cXhslant7k%3D

    Article  CAS  Google Scholar 

  • JA Sayer JD Cotter-Howells C Watson S Hillier GM. Gadd (1999) ArticleTitleLead mineral transformation by fungi Curr Biol 9 691–694 Occurrence Handle10.1016/S0960-9822(99)80309-1 Occurrence Handle1:CAS:528:DyaK1MXktlOqt7c%3D Occurrence Handle10395543

    Article  CAS  PubMed  Google Scholar 

  • JA Sayer GM. Gadd (1997) ArticleTitleSolubilization and transformation of insoluble inorganic metal compounds to insoluble metal oxalates by Aspergillus niger Mycol Res 101 653–661 Occurrence Handle10.1017/S0953756296003140 Occurrence Handle1:CAS:528:DyaK2sXks1Oju7g%3D

    Article  CAS  Google Scholar 

  • JA Sayer SL Raggett GM. Gadd (1995) ArticleTitleSolubilization of insoluble metal compounds by soil fungi: development of a screening methods for solubilizing ability and metal tolerance Mycol Res 99 987–993 Occurrence Handle1:CAS:528:DyaK2MXptFOisbk%3D

    CAS  Google Scholar 

  • K. Sterflinger (2000) ArticleTitleFungi as geologic agents Geomicrobiol J 17 97–124 Occurrence Handle10.1080/01490450050023791 Occurrence Handle1:CAS:528:DC%2BD3cXktFKnurk%3D

    Article  CAS  Google Scholar 

  • AE Taunton SA Welch JF. Banfield (2000) ArticleTitleMicrobial controls on phosphate and lanthanide distributions during granite weathering and soil formation Chem Geol 169 371–382 Occurrence Handle10.1016/S0009-2541(00)00215-1 Occurrence Handle1:CAS:528:DC%2BD3cXls1Crtbw%3D

    Article  CAS  Google Scholar 

  • AS Taylor JD Blum AC Lasaga IN. MacInnis (2000) ArticleTitleKinetics of dissolution and Sr release during biotite and phlogopite weathering Geochim Cosmochim Acta 64 1191–1208 Occurrence Handle10.1016/S0016-7037(99)00369-5 Occurrence Handle1:CAS:528:DC%2BD3cXhvF2lsbo%3D

    Article  CAS  Google Scholar 

  • EP Verrecchia JL Dumont KE. Verrecchia (1993) ArticleTitleRole of calcium oxalate biomineralization by fungi in the formation of calcretes: a case study from Nazareth, Israel J Sedim Petrol 63 1000–1006 Occurrence Handle1:CAS:528:DyaK2cXislGktLw%3D

    CAS  Google Scholar 

  • H. Wallander (2000) ArticleTitleUptake of P from apatite by Pinus sylvestris seedlings colonised by different ectomycorrhizal fungi Plant and Soil 218 249–256 Occurrence Handle10.1023/A:1014936217105 Occurrence Handle1:CAS:528:DC%2BD3cXhvVGrtbk%3D

    Article  CAS  Google Scholar 

  • SA Welch AE Taunton JF. Banfield (2002) ArticleTitleEffect of microorganisms and microbial metabolites on apatite dissolution Geomicrobiol J 19 343–367 Occurrence Handle10.1080/01490450290098414 Occurrence Handle1:CAS:528:DC%2BD38XlsF2jt78%3D

    Article  CAS  Google Scholar 

  • SA Welch WJ. Ullman (1993) ArticleTitleThe effect of organic acids on plagioclase dissolution rates and stoichiometry Geochim Cosmochim Acta 57 2725–2736 Occurrence Handle10.1016/0016-7037(93)90386-B Occurrence Handle1:CAS:528:DyaK3sXmtVOisbo%3D

    Article  CAS  Google Scholar 

  • SA Welch WJ. Ullman (1999) ArticleTitleThe effect of microbial glucose metabolism on bytownite feldspar dissolution rates between 5° and 35 °C Geochim Cosmochim Acta 63 3247–3259 Occurrence Handle10.1016/S0016-7037(99)00248-3 Occurrence Handle1:CAS:528:DyaK1MXotVCksrk%3D

    Article  CAS  Google Scholar 

  • C White JA Sayer GM. Gadd (1997) ArticleTitleMicrobial solubilization and immobilization of toxic metals: key biogeochemical processes for treatment of contamination FEMS Microbiol Rev 20 503–516 Occurrence Handle10.1016/S0168-6445(97)00029-6 Occurrence Handle1:CAS:528:DyaK2sXltl2msb8%3D Occurrence Handle9299717

    Article  CAS  PubMed  Google Scholar 

  • MA. Whitelaw (2000) ArticleTitleGrowth promotion of plants inoculated with phosphate-solubilizing fungi Adv Agron 69 99–151 Occurrence Handle1:CAS:528:DC%2BD3cXivVehurc%3D

    CAS  Google Scholar 

  • MA Whitelaw TJ Harden KR. Heylar (1999) ArticleTitlePhosphate solubilisation in solution culture by the soil fungus Penicillium radicum Soil Biol Biochem 31 655–665 Occurrence Handle10.1016/S0038-0717(98)00130-8 Occurrence Handle1:CAS:528:DyaK1MXjs1Cisbc%3D

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Geoffrey M. Gadd.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Adeyemi, A.O., Gadd, G.M. Fungal degradation of calcium-, lead- and silicon-bearing minerals. Biometals 18, 269–281 (2005). https://doi.org/10.1007/s10534-005-1539-2

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10534-005-1539-2

Keywords