From 1c8ab47a38119827d48a9b1c39d57a2274efb636 Mon Sep 17 00:00:00 2001
From: Jessie <55000761+jbmchls@users.noreply.github.com>
Date: Wed, 20 Nov 2024 16:22:38 -0500
Subject: [PATCH] Update JointGenotypingTasks.wdl

sample number threshold lowered to 10
---
 tasks/broad/JointGenotypingTasks.wdl | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tasks/broad/JointGenotypingTasks.wdl b/tasks/broad/JointGenotypingTasks.wdl
index 1a301cdc1e..b04a1e1fd2 100644
--- a/tasks/broad/JointGenotypingTasks.wdl
+++ b/tasks/broad/JointGenotypingTasks.wdl
@@ -4,7 +4,7 @@ version 1.0
 task CheckSamplesUnique {
   input {
     File sample_name_map
-    Int sample_num_threshold = 50
+    Int sample_num_threshold = 10
 
     Int machine_mem_mb = 1000
     Int disk_size_gb = 10